Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCGGGGCCCAAGTTATGAGGAGTCAA
...((((((((((((((((((.&)))))).)))...........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178580
GeneSymbolHM13
Binding site1330,1361
Score1.0
Seed0
Au0.426
Energy-22.2
Binding len31
Me-6.515
Phylopstem1.6809701433333333
Phylopflank1.1717301249999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure