Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGCTCCGTACGCTGCGC
.(((((((((((.((((.(((&))).))))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178580
GeneSymbolHM13
Binding site260,283
Score0.923
Seed1
Au0.338
Energy-22.8
Binding len23
Me-5.082
Phylopstem0.1432585833333333
Phylopflank0.5508811149999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure