Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGAGGTTAAGAAATTTGCTAGG
..(((((.(((((((((((...&)))))))))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178582
GeneSymbolHM13
Binding site1186,1214
Score0.846
Seed0
Au0.559
Energy-23.6
Binding len28
Me-7.271
Phylopstem5.03010909090909
Phylopflank5.164817202499998
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure