Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGACGGCCGCTAGCCTCCGGGGCGCCGCGTCGGGGCCGGG
..((((((((.(((((((.((.&)))))))))............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178586
GeneSymbolPPP2R5C
Binding site1547,1593
Score0.846
Seed1
Au0.279
Energy-22.6
Binding len46
Me-7.782
Phylopstem2.8999924999999998
Phylopflank2.1615739825
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure