Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGGAGTTACACTCAGCACTCGCAGTATGAGACATTGTGTGCCAGC
..((((((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178819
GeneSymbolGPAT4
Binding site180,228
Score1.0
Seed1
Au0.515
Energy-23.2
Binding len16
Me-4.957
Phylopstem0.38867724285714295
Phylopflank1.2821595674999997
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure