Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTGCAGCTGCT
..(((((((((((....((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178820
GeneSymbolFBXO27
Binding site1122,1138
Score0.846
Seed1
Au0.471
Energy-23.9
Binding len16
Me-6.782
Phylopstem5.957430909090909
Phylopflank4.80784152375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure