Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGGGCTGCAGCTGGGAT
((.(((((((((((...((((&))))....))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350083
GeneSymbolSAMD9L
Binding site875,898
Score1.0
Seed0
Au0.368
Energy-25.7
Binding len23
Me-6.464
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure