Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGGACCTCAGTGA
((((((.((((((((((((...&)))))))))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178828
GeneSymbolSPATA31E1
Binding site2176,2197
Score1.0
Seed0
Au0.426
Energy-25.8
Binding len21
Me-5.481
Phylopstem2.7587567833333337
Phylopflank2.4870129525000007
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure