Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTGTCAACCCAGCCACAGCAGCTGCC
..(((((((((((((...(((&.))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178828
GeneSymbolSPATA31E1
Binding site1237,1265
Score0.923
Seed1
Au0.412
Energy-22.7
Binding len21
Me-5.19
Phylopstem4.07421038125
Phylopflank4.2906957312500005
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure