Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCATCCACAGCTGCAGG
(((((((((.((.((...(((&)))..)).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178828
GeneSymbolSPATA31E1
Binding site4297,4318
Score1.0
Seed1
Au0.368
Energy-21.8
Binding len21
Me-6.702
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure