Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAAATTTCACCTTTCTGAGAAGA&CTGCTCAGAGAGGG
.........((((((((((.((.&)).)))))))))).
Details
MiRNAhsa-miR-513c-3p
RefseqIDNM_001330518
GeneSymbolPCYT2
Binding site1334,1348
Score0.808
Seed0
Au0.397
Energy-17.9
Binding len14
Me-20.48
Phylopstem0.20968323
Phylopflank0.3095313624999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure