Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCTGTGGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178836
GeneSymbolPLD6
Binding site1596,1629
Score0.846
Seed1
Au0.382
Energy-27.6
Binding len22
Me-10.109
Phylopstem-0.3386095818181818
Phylopflank0.016110024999999986
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure