Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTGCGGCAGGAGCAGCTGCAGG
((((((((((.((((((..((&)).))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178837
GeneSymbolDNAAF3
Binding site1464,1488
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len24
Me-6.762
Phylopstem1.5190733
Phylopflank2.112653992375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure