Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGGCTGTGGCTGCT
..((((((((((((....(((&)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178841
GeneSymbolRNF166
Binding site1591,1610
Score0.923
Seed1
Au0.324
Energy-21.8
Binding len19
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure