Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCCCAGGAGTTCGAGGATGCAGTGA
(((((..((((((((((((.((&)).)))))))).....))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178849
GeneSymbolHNF4A
Binding site5462,5490
Score0.923
Seed0
Au0.485
Energy-23.8
Binding len28
Me-7.382
Phylopstem2.1230557999999995
Phylopflank2.8539605450000005
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure