Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGGGTGCCCTTTGCCGCTGTGGCTGCGGC
(((((((((((((.((((((.&.)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178858
GeneSymbolSFXN2
Binding site597,631
Score0.846
Seed1
Au0.368
Energy-26.0
Binding len22
Me-4.794
Phylopstem-0.3730319230769231
Phylopflank0.14710828749999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure