Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACATATTCTTGTATGTACCTTCCCAGCAGGC
.((((((((((((((((((((.&))))))))).....)))))))..........)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_178862
GeneSymbolSTT3B
Binding site1322,1358
Score0.923
Seed1
Au0.618
Energy-18.6
Binding len36
Me-3.793
Phylopstem-0.1315719514285715
Phylopflank0.26582896589285726
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure