Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGGGCCC
....(((.(((((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_178864
GeneSymbolNPAS4
Binding site2348,2363
Score0.923
Seed0
Au0.338
Energy-25.2
Binding len15
Me-11.86
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure