Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCCGCCAGACTGCC
..(((((((((((((...(((&)))))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178864
GeneSymbolNPAS4
Binding site3169,3188
Score0.923
Seed1
Au0.294
Energy-19.6
Binding len19
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure