Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCTGCCGCTGTTGTAGA
(((((((.(((((.(..((((&))))..).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178868
GeneSymbolCMTM8
Binding site648,670
Score1.0
Seed1
Au0.441
Energy-22.0
Binding len22
Me-7.341
Phylopstem4.076346242857142
Phylopflank1.94336659325
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure