Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCAGTGGCTCGACGATGGAGGAGCCGCAGCGCGC
.(((.(((((((((.(.....&.).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_178868
GeneSymbolCMTM8
Binding site274,313
Score0.846
Seed0
Au0.265
Energy-20.5
Binding len16
Me-8.648
Phylopstem0.10603995555555559
Phylopflank3.430103495
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure