Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCGCAGCCCCAGC
(((..((((((((((...(((&)))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_180976
GeneSymbolPPP2R5D
Binding site213,232
Score0.846
Seed0
Au0.279
Energy-21.6
Binding len19
Me-11.322
Phylopstem0.26048825
Phylopflank-0.047285426249999984
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure