Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCTTAAAAGGAGTCAGG
..(((((((((((..(((....&)))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_180991
GeneSymbolSLCO4C1
Binding site4609,4626
Score0.923
Seed1
Au0.735
Energy-21.1
Binding len17
Me-6.549
Phylopstem-0.3424678181818182
Phylopflank-0.08743891768749996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure