Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGAGAGGAGCTGTGG
(((.(((((((((((.......&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_180991
GeneSymbolSLCO4C1
Binding site4003,4018
Score1.0
Seed0
Au0.529
Energy-21.1
Binding len15
Me-7.203
Phylopstem0.32294938181818184
Phylopflank0.23800979750000004
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure