Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTCAAACCCAGTTGCAC
.((((((((.((((....(((&))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_180991
GeneSymbolSLCO4C1
Binding site1607,1628
Score0.862
Seed1
Au0.544
Energy-18.6
Binding len21
Me-6.004
Phylopstem0.685545525
Phylopflank0.5900420349999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure