Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACGGCTGGAGGAACTTCCATCCTCAATGTCTCCAGCGCTGCAAC
((((((((.(((((((((((.&))))))))))).)...........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_180991
GeneSymbolSLCO4C1
Binding site280,328
Score0.923
Seed1
Au0.471
Energy-20.8
Binding len48
Me-4.994
Phylopstem2.7630704545454545
Phylopflank2.1868132174999997
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end7
PositionCDS
2D Structure