Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGAGAGTGTTGGCGCTGCCCCCAACGCCAGTGA
(((((((..((((((((((((.&))))))))))))...................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181050
GeneSymbolAXIN1
Binding site2166,2205
Score0.846
Seed1
Au0.338
Energy-26.8
Binding len39
Me-7.308
Phylopstem0.7307084166666667
Phylopflank0.31111651875
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure