Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCCGCCGGCTGTG
..(((((((((((((..((((&)))).))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181050
GeneSymbolAXIN1
Binding site3413,3433
Score0.846
Seed1
Au0.294
Energy-24.7
Binding len20
Me-5.19
Phylopstem2.4045683571428573
Phylopflank1.34438236375
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure