Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTGCATTGCAGTAGCAT
.(((.(((((((.((((((((&))).)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181054
GeneSymbolHIF1A
Binding site2874,2895
Score0.846
Seed0
Au0.735
Energy-18.9
Binding len21
Me-9.201
Phylopstem5.026547466666667
Phylopflank4.572409542500001
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end8
Position3UTR
2D Structure