Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAACTCGGGGGGCTCAGCTTACAGTGA
(((((((((((((((((((...&))))))))....))))))........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181078
GeneSymbolIL21R
Binding site1523,1555
Score0.846
Seed1
Au0.353
Energy-25.4
Binding len32
Me-3.938
Phylopstem0.22731119354838705
Phylopflank-0.2103736325
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure