Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGCCCAGCTGCC
..(((((((.((((...((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181078
GeneSymbolIL21R
Binding site229,248
Score1.0
Seed1
Au0.397
Energy-23.7
Binding len19
Me-7.168
Phylopstem0.34390118000000003
Phylopflank-0.07636616449999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure