Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTATTGTATGCAGCGCTGACCTGTACTCTTCTTCCCAGGG
.(((((((((((((((((....&)))).)))))))))........................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181093
GeneSymbolSCYL3
Binding site3238,3281
Score0.821
Seed1
Au0.515
Energy-18.4
Binding len43
Me-3.793
Phylopstem-0.5163017023809523
Phylopflank-0.5485844387499998
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end4
Position3UTR
2D Structure