Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGACTGATAGCA
.....(((((((((((((((.&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181093
GeneSymbolSCYL3
Binding site6164,6181
Score0.923
Seed0
Au0.632
Energy-18.9
Binding len17
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure