Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCATTGTCGTTTTTTTTATTCTAATATATGTGCTAA
...(((((((((((((((((((&)))))))))))))......................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181268
GeneSymbolCMTM1
Binding site583,625
Score0.923
Seed0
Au0.662
Energy-18.4
Binding len42
Me-6.515
Phylopstem3.2882236317073175
Phylopflank3.7242309649999994
Longest consecutive pairings13
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure