Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGAAACAACCGGAGACTGCC
..((((((.(((((((.((((&))))...))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181268
GeneSymbolCMTM1
Binding site124,147
Score0.846
Seed1
Au0.397
Energy-21.2
Binding len23
Me-6.013
Phylopstem0.34845899999999996
Phylopflank-0.05150404125000005
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure