Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAGACTGCCGCAGCC
.....((((((((.((..(((&)))....)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181272
GeneSymbolCMTM1
Binding site134,153
Score0.846
Seed0
Au0.485
Energy-20.1
Binding len19
Me-14.522
Phylopstem-1.11986625
Phylopflank-0.27229028125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure