Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCCGCAGCCCTGCGGT
(((((((((((((.((.....&)).))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181296
GeneSymbolCMTM1
Binding site141,160
Score0.846
Seed1
Au0.441
Energy-20.6
Binding len19
Me-4.794
Phylopstem6.048983333333333
Phylopflank5.779806787499998
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure