Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGAGGCTGCACTGCAGC
((((((.(((((((....((.&))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181307
GeneSymbolMRPL52
Binding site61,80
Score0.846
Seed0
Au0.324
Energy-19.1
Binding len19
Me-6.45
Phylopstem2.497798285714286
Phylopflank0.634348007375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure