Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCGAACCAGGAGCTGCT
..((((((.(((((((((((.&))))))..)))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181311
GeneSymbolTAFAZZIN
Binding site1483,1505
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len22
Me-6.013
Phylopstem0.3271187785714286
Phylopflank0.21081626625
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure