Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGTAAATACGGCTCTGTGTTCCCTAGCAGCTGCGGG
(((((((((((((((((....&.)))))))............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181332
GeneSymbolNLGN4X
Binding site4325,4367
Score0.846
Seed1
Au0.441
Energy-21.4
Binding len31
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure