Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTTTGAGACTGATTGTGGCCAGGG
.((((((.((((((..((((((&)))))).........)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001350145
GeneSymbolPATJ
Binding site741,769
Score0.846
Seed1
Au0.544
Energy-18.8
Binding len28
Me-7.075
Phylopstem3.244801166666667
Phylopflank2.6678804200000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure