Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCTGCAGAGAGACAAGGCGGCGGCGGCTGCT
..((((((((.(((((...((&.))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181335
GeneSymbolARHGAP8
Binding site48,85
Score0.846
Seed1
Au0.324
Energy-24.3
Binding len21
Me-7.782
Phylopstem-0.1857871875
Phylopflank-0.08460847500000013
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure