Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAATACAGCTACTGTAGTTGCT
..(((((((((((((((.(((&)))...)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181352
GeneSymbolATF7IP
Binding site2391,2416
Score0.833
Seed1
Au0.515
Energy-20.4
Binding len25
Me-4.957
Phylopstem4.951940183333332
Phylopflank5.14029620375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure