Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCCAAGCGTGTCCCGGGCCGCAGCAGCAGA
((((.(((((((((....((.&.))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181356
GeneSymbolSUPT3H
Binding site59,93
Score0.846
Seed0
Au0.338
Energy-22.2
Binding len20
Me-9.025
Phylopstem-0.8624682222222222
Phylopflank-0.9452260125000005
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure