Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCAAAGCAAGGGAGCGTGA
(((..((((((((((..(((((&)))))..)).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181426
GeneSymbolCCDC39
Binding site323,345
Score0.923
Seed0
Au0.574
Energy-18.9
Binding len22
Me-11.322
Phylopstem3.3047009090909087
Phylopflank2.7343316707500005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure