Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATCACCACATTCTGGGGCCAGTC
.(((((((((..(((((((...&)))))))............))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181435
GeneSymbolC1QTNF3
Binding site364,393
Score0.846
Seed1
Au0.426
Energy-26.5
Binding len29
Me-9.965
Phylopstem4.642553555555556
Phylopflank4.314355225000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure