Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCGGGAATGAGCTCAGTT
.((((((((.(((((((((...&))))))))).)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181449
GeneSymbolCD300E
Binding site1860,1880
Score0.846
Seed1
Au0.515
Energy-22.1
Binding len20
Me-5.036
Phylopstem3.3472004444444443
Phylopflank3.5242567817900006
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure