Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAAATTTCACCTTTCTGAGAAGA&TCTTAGAGGGTGAT
......(((((.((((((((...&))))))))))))).
Details
MiRNAhsa-miR-513c-3p
RefseqIDNM_181460
GeneSymbolPAX3
Binding site2799,2813
Score0.808
Seed0
Au0.603
Energy-16.7
Binding len14
Me-18.913
Phylopstem4.731283125
Phylopflank2.421264157499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure