Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCGGCACAGCGGCAAGCTTGCATGTATGCCAGC
..(((((((((.((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181486
GeneSymbolTBX5
Binding site1665,1701
Score1.0
Seed1
Au0.338
Energy-20.3
Binding len17
Me-8.304
Phylopstem-0.4243650666666666
Phylopflank0.8790552775000007
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure