Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAAGCTGCCAGTGA
(((((((..((((((((((...&))))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181501
GeneSymbolITGA1
Binding site159,179
Score0.846
Seed1
Au0.412
Energy-27.6
Binding len20
Me-7.308
Phylopstem5.000821800000001
Phylopflank5.5681095812500025
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure